3 years ago

Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements.

Rick Farouni, Luca Pinello, Guo-Cheng Yuan
With the increasing amount of genomic and epigenomic data in the public domain, a pressing challenge is to integrate these data to investigate the role of epigenetic mechanisms in regulating gene expression and maintenance of cell-identity. To this end, we have implemented a computational pipeline to systematically study epigenetic variability and uncover regulatory DNA sequences.

Publisher URL: http://doi.org/10.1093/bioinformatics/bty031

DOI: 10.1093/bioinformatics/bty031

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