Nature Methods
Nature Methods
5 years ago

M3: an integrative framework for structure determination of molecular machines

M3: an integrative framework for structure determination of molecular machines
Andrea Graziadei, João P G L M Rodrigues, Alexandre M J J Bonvin, Ezgi Karaca, Teresa Carlomagno
We present a broadly applicable, user-friendly protocol that incorporates sparse and hybrid experimental data to calculate quasi-atomic-resolution structures of molecular machines. The protocol uses the HADDOCK framework, accounts for extensive structural rearrangements both at the domain and atomic levels and accepts input from all structural and biochemical experiments whose data can be translated into interatomic distances and/or molecular shapes.

Publisher URL: http://dx.doi.org/10.1038/nmeth.4392

DOI: 10.1038/nmeth.4392

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