bioRxiv Biochemistry
bioRxiv Biochemistry
5 years ago

Molecular Basis For The Specific And Multivariate Recognitions Of RNA Substrates By Human hnRNPA2/B1

Wu, B., Patil, Ma, Su, S., H., Gan, Jaffrey, D. P., J., Liu, S. R.
Human hnRNPA2/B1 is an RNA-binding protein that plays important roles in a variety of biological processes, from mRNA maturation, trafficking and translation to regulation of gene expression mediated by long non-coding RNAs and microRNAs. hnRNPA2/B1 contains two RNA recognition motifs (RRM) that provide sequence-specific recognition of widespread RNA substrates including recently reported m6A-containing motifs. Here we determined the first crystal structures of tandem RRM domains of hnRNPA2/B1 in complex with various RNA substrates. Our structures reveal that hnRNPA2/B1 can bind two RNA elements in an antiparallel fashion with a sequence preference for AGG and UAG by RRM1 and RRM2, respectively, suggesting an RNA matchmaker mechanism during the hnRNPA2/B1 function. However, our combined studies did not observe specific binding of m6A by either the RRM domains or the full-length hnRNPA2/B1, implying that the "reader" function of hnRNPA2/B1 may adopt an unknown mechanism that remains to be characterized.

Publisher URL: http://biorxiv.org/cgi/content/short/144345v1

DOI: 10.1101/144345

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